Korean Journal of Microbiology

Table. 1.

Table. 1. Sample statistics estimated by OTU and ASV analysis corresponding to the six samples analyzed in this study, determined V4 hypervariable region of the bacterial 16S rRNA gene sequenced by Illumina MiSeq platform.

For inverse Simpson diversity, the value closer to 1 might be considered more diverse

Analysis method Sample OTU/ASV Chao1 Shannon Inverse Simpson Good’s coverage
OTU SD1 4,710 13,064.92 6.15 0.99 0.92
SD2 5,597 16,775.62 6.24 0.99 0.91
SD3 6,780 19,147.24 6.30 0.99 0.92
SD4 5,807 17,414.20 6.20 0.99 0.92
SD5 5,658 17,223.50 5.59 0.95 0.92
SD6 5,299 16,428.76 6.08 0.98 0.91
ASV SD1 663 663.10 7.40 0.98 0.99
SD2 735 735.71 7.48 0.99 0.99
SD3 795 799.13 7.50 0.99 0.99
SD4 746 747.44 7.42 0.98 0.99
SD5 536 537.15 4.89 0.84 0.99
SD6 709 709.48 6.70 0.95 0.99
Korean J. Microbiol. 2022;58:67-74 https://doi.org/10.7845/kjm.2022.2025
© 2022 Korean J. Microbiol.